> For the complete documentation index, see [llms.txt](https://book.ncrnalab.org/teaching/llms.txt). Markdown versions of documentation pages are available by appending `.md` to page URLs; this page is available as [Markdown](https://book.ncrnalab.org/teaching/part-iii.-ngs-data-analyses/8.cfdna/8.1.basic-cfdna-seq-analyses.md).

# 8.1.Basic cfDNA-seq Analyses

## 1) Background

## 2) Workflow

## 3) Running Steps

### 2a) Input files

### 2b) Example output

<figure><img src="/files/oGgFFtJgWUcv2a2QrE4C" alt=""><figcaption></figcaption></figure>

###