8.cfDNA

Previous cfDNA studies have demonstrated that various features could be derived from cfDNA-seq and cfDNA methylation (cfDNAmet) sequencing data for diagnostic measurement. These features include:
cfDNAmet-seq
methylation level at promoter region
methylation level at gene body level
...
cfDNA-seq
Mutation (requires deep sequencing depth)
CNV
Nucleosome occupancy footprint (scores: ration/CPM/WPS) (Pipelines by Y Li)
Fragment size profile
End motif pattern
...
Instructions: Analyze cfDNA features and Related cfDNA publications by PF Bao
Literatures: cfDNA-seq Analysis - Lu Lab Docs​

7.2.RNA Structure

8.1.Basic cfDNA-seq Analyses

Last modified 7d ago